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NSF Center for High-Performance Reconfigurable Computing

Publications

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Jump to: Abram, Gregory   Adhinarayanan, Vignesh   Aji, Ashwin M.   Al Hajri, Qais   Al-Muhtadi, Jalal   Amritkar, Amit   Anandakrishnan, Ramu   Archuleta, Jeremy   Archuleta, Jeremy S.   Arisoylu, Mustafa   Ashwin Aji   Ayyorgun, Sami   Balaji Subramaniam   Balaji, Pavan   Banerjee, Amitabha   Banerjee, Sharmi   Bisset, Keith   Bisset, Keith R.   Braithwaite, Ryan   Brown, Eric   Brown, Richard   Cao, Yong   Ching, Avery   Cui, Xuewen   Daga, Mayank   Darling, Aaron E.   Dash, Sajal   Datoc, Michelle   Datta, Pallab   del Mundo, Carlo   Dutta, Bishwajit   E. McClure, James   Elteir, Marwa   Engelhart, Adam   Eugene, Kolker   Faris, Jack   Feng, Annette   Feng, Annette C.   Feng, Wu-chun   Fisk, Michael E.   Frachtenberg, Eitan   Gabriel Martinez   Ganesh Narayanaswamy   Gans, Jason D.   Gardner, Mark   Gardner, Mark K.   Gilbert, Jack   Goddard, Christopher Joseph   Goel, Garvit   Gondhalekar, Atharva   Harb, Islam   Hassan, Mohamed W.   Hay, Jeffrey R.   Helal, Ahmed   Helal, Ahmed E.   Herrera, Isaiah   Hou, Kaixi   Hsu, Chung-hsing   Huang, Song   Hurwitz, Justin (Gus)   J. Gans   Jha, Sonal   Ji, Feng   Jin, Cheng   Kalidas, Rubasri   Kalim, Umar   Kapadia, Apu C.   Kenneth Lee   Krommydas, Konstantinos   Kumar, Mithilesh   Lama, Palden   Lee, Kenneth   Lin, Heshan   Martinez, Gabriel   Mayank Daga   McCaskey, Alexander J.   Minor, Austin Chase   Mohamed, Nabeel   Mohamed, Nabeel M.   Mohamed, Nabeel Meeramohideen   Narayanaswamy, Ganesh   Narayanaswamy, Ganesh,   Nourian, Marziyeh   P. Balaji   Panwar, Lokendra S.   Panwar, Lokendra Singh   Paul D. Sathre   Pereira, Karl   Petrini, Fabrizio   Philp, Ian R.   Pickering, Brent P.   Pumma, Sarunya   Rao, Nageswara S. V.   Rong Ge   Ryan Braithwaite   Sathre, Paul   Scogland, Thomas R. W.   Sharma, Sushant   Shu, Xiaokui   Singh, Ajeet   Subramaniam, Balaji   Sun, Jun   Thorsen, Oystein   Thulasidasan, Sunil   Timoshevskaya, Nataliya   Tinnakornsrisuphap, Peerapol   Tolmie, Don E.   Vanichpun, Sarut   Veeraraghavan, Malathi   Verma, Anshuman   Vishwanath, Venkatram   Wang, Hao   Wanye, Frank   Warren, Andrew S.   Warren, Michael   Weigle, Eric   Xiao, Shucai   Yang Jiao   Yin, Jiangling   Youssef, Karim   Yu, Xiaodong   Zhang, Da   Zhang, Jing   Zhang, Xiao  

• Anandakrishnan, Ramu
  
  
• Accelerating Electrostatic Surface Potential Calculation with Multi-Scale Approximation on Graphics Processing Units.
  Ramu Anandakrishnan, Thomas R.W. Scogland, Andrew T. Fenley, John C. Gordon, Wu-chun Feng, Alexey V. Onufriev.
  In Journal of Molecular Graphics and Modelling, 28 904-910, April 2010.
    Preprint               Citations:  [ BibTeX    XML    PlainText ]   
• Braithwaite, Ryan
  
  
• Automatic NUMA Characterization using Cbench.
  Ryan Braithwaite, Wu-chun Feng, Patrick McCormick.
  In Proceedings of the 3rd ACM/SPEC International Conference on Performance Engineering (ICPE), Boston, MA, April 2012.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Daga, Mayank
  
  
• Architecture-Aware Mapping and Optimization on a 1600-Core GPU.
  Mayank Daga, Thomas R. W. Scogland, Wu-chun Feng.
  In Proceedings of the 17th IEEE International Conference on Parallel and Distributed Systems, Tainan, Taiwan, December 2011.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• On the Efficacy of a Fused CPU+GPU Processor for Parallel Computing.
  Mayank Daga, Ashwin Aji, Wu-chun Feng.
  In Proceedings of the Symposium on Application Accelerators in High-Performance Computing, Knoxville, Tennessee, USA, July 2011.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Elteir, Marwa
  
  
• StreamMR: An Optimized MapReduce Framework for AMD GPUs.
  Marwa Elteir, Heshan Lin, Wu-chun Feng, Thomas R. W. Scogland.
  In Proceedings of the 17th IEEE International Conference on Parallel and Distributed Systems, Tainan, Taiwan, December 2011.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Performance Characterization and Optimization of Atomic Operations on AMD GPUs.
  Marwa Elteir, Heshan Lin, Wu-chun Feng.
  In Proceedings of the IEEE Cluster 2011, Austin, TX, USA, September 2011.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Feng, Wu-chun
  
  
• OpenCL and the 13 Dwarfs: A Work In Progress.
  Wu-chun Feng, Heshan Lin, Thomas R. W. Scogland, Jing Zhang.
  In Proceedings of the 3rd ACM/SPEC International Conference on Performance Engineering (ICPE), Boston, MA, April 2012.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Gardner, Mark
  
  
• Characterizing the Challenges and Evaluating the Efficacy of a CUDA-to-OpenCL Translator.
  Mark Gardner, Paul Sathre, Wu-chun Feng, Gabriel Martinez.
  In Parallel Computing, 39 (12): 769-786, December 2013.
    Preprint               Citations:  [ BibTeX    XML    PlainText ]   
• Gondhalekar, Atharva
  
  
•   On the Three P’s of Parallel Programming for Heterogeneous Computing: Performance, Productivity, and Portability.
  Atharva Gondhalekar, Wu-chun Feng.
  In Proceedings of the 2023 IEEE High Performance Extreme Computing Conference (HPEC), Waltham, MA, September 2023.
  Outstanding Student Paper Award.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• On the Characterization of the Performance-Productivity Gap for FPGA.
  Atharva Gondhalekar, Thomas Twomey, Wu-chun Feng.
  In Proceedings of the 2022 IEEE High Performance Extreme Computing Conference (HPEC), Waltham, MA, September 2022.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Exploring FPGA Optimizations in OpenCL for Breadth-First Search on Sparse Graph Datasets.
  Atharva Gondhalekar, Wu-chun Feng.
  In Proceedings of the 30th International Conference on Field-Programmable Logic and Applications, Gothenburg, Sweden, September 2020.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Hassan, Mohamed W.
  
  
• C to D-Wave: A High-level C Compilation Framework for Quantum Annealers.
  Mohamed W. Hassan, Scott Pakin, Wu-chun Feng.
  In Proceedings of the IEEE High Performance Extreme Computing Conference (HPEC), Waltham, MA, September 2019.
  Innovative Paper Award.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Exploring FPGA-specific Optimizations for Irregular OpenCL Applications.
  Mohamed W. Hassan, Ahmed E. Helal, Peter M. Athanas, Wu-chun Feng, Yasser Y. Hanafy.
  In Proceedings of the International Conference on Reconfigurable Computing and FPGAs (ReConFig), Cancun, Mexico, December 2018.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Helal, Ahmed E.
  
  
• Adaptive Task Aggregation for High-Performance Sparse Solvers on GPUs.
  Ahmed E. Helal, Ashwin M. Aji, Michael L. Chu, Bradford M. Beckmann, Wu-chun Feng.
  In Proceedings of the 28th International Conference on Parallel Architectures and Compilation Techniques, Seattle, WA, September 2019.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• CommAnalyzer: Automated Estimation of Communication Cost and Scalability on HPC Clusters from Sequential Code.
  Ahmed E. Helal, Changhee Jung, Wu-chun Feng, Yasser Y. Hanafy.
  In Proceedings of the 27th International Symposium on High-Performance Parallel and Distributed Computing (ACM HPDC 2018), Tempe, Arizona, USA, June 2018.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• AutoMatch: An Automated Framework for Relative Performance Estimation and Workload Distribution on Heterogeneous HPC Systems.
  Ahmed E. Helal, Wu-chun Feng, Changhee Jung, Yasser Y. Hanafy.
  In Proceedings of the IEEE International Symposium on Workload Characterization (IISWC), Seattle, WA, October 2017.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Hou, Kaixi
  
  
• Highly Efficient Compensation-based Parallelism for Wavefront Loops on GPUs.
  Kaixi Hou, Hao Wang, Wu-chun Feng, Jeffrey S. Vetter, Seyong Lee.
  In Proceedings of the 32nd IEEE International Parallel and Distributed Processing Symposium (IPDPS), Vancouver, British Columbia, Canada, May 2018.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Krommydas, Konstantinos
  
  
• A Framework for Auto-Parallelization and Code Generation: An Integrative Case Study with Legacy FORTRAN Codes.
  Konstantinos Krommydas, Paul Sathre, Ruchira Sasanka, Wu-chun Feng.
  In Proceedings of the 47th International Conference on Parallel Processing (ICPP), Eugene, OR, August 2018.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Bridging the Performance-Programmability Gap for FPGAs via OpenCL: A Case Study with OpenDwarfs. (Poster Paper, see "Posters" section for poster).
  Konstantinos Krommydas, Ahmed Helal, Anshuman Verma, Wu-chun Feng.
  In Proceedings of the 24th IEEE International Symposium on Field-Programmable Custom Computing Machines, Washington, DC, May 2016.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Martinez, Gabriel
  
  
• CU2CL: A CUDA-to-OpenCL Translator for Multi- and Many-Core Architectures.
  Gabriel Martinez, Mark Gardner, Wu-chun Feng.
  In Proceedings of the 17th IEEE International Conference on Parallel and Distributed Systems, Tainan, Taiwan, December 2011.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• McCaskey, Alexander J.
  
  
• A Language and Hardware Independent Approach to Quantum–Classical Computing.
  Alexander J. McCaskey, Eugene F. Dumitrescu, Dmitry Liakh, Mengsu Chen, Wu-chun Feng, Travis S. Humble.
  In SoftwareX, 7 245--254, August 2018.
    Preprint               Citations:  [ BibTeX    XML    PlainText ]   
• Minor, Austin Chase
  
  
• Applying the Midas Touch of Reproducibility to High-Performance Computing.
  Austin Chase Minor, Wu-chun Feng.
  In Proceedings of the 2022 IEEE High Performance Extreme Computing Conference (HPEC), Waltham, MA, September 2022.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Pereira, Karl
  
  
• Spectral Method Characterization on FPGA and GPU Accelerators.
  Karl Pereira, Peter Athanas, Heshan Lin, Wu-chun Feng.
  In Proceedings of the International Conference on Reconfigurable Computing and FPGAs (ReConFig), Cancun, Mexico, November 2011.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Sathre, Paul
  
  
• Edge-Connected Jaccard Similarity for Graph Link Prediction on FPGA.
  Paul Sathre, Atharva Gondhalekar, Wu-chun Feng.
  In Proceedings of the 2022 IEEE High Performance Extreme Computing Conference (HPEC), Waltham, MA, September 2022.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• MetaCL: Automated 'Meta' OpenCL Code Generation for High-Level Synthesis on FPGA.
  Paul Sathre, Atharva Gondhalekar, Mohamed Hassan, Wu-chun Feng.
  In Proceedings of the IEEE High Performance Extreme Computing Conference (HPEC), Waltham, MA, September 2020.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• On the Portability of GPU-Accelerated Applications via Automated Source-to-Source Translation.
  Paul Sathre, Mark Gardner, Wu-chun Feng.
  In Proceedings of the HPC Asia: International Conference on High Performance Computing in Asia-Pacific Region, Guangzhou, China, January 2019.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• A Composable Workflow for Productive Heterogeneous Computing on FPGAs via Whole-Program Analysis and Transformation.
  Paul Sathre, Ahmed E. Helal, Wu-chun Feng.
  In Proceedings of the International Conference on Reconfigurable Computing and FPGAs (ReConFig), Cancun, Mexico, December 2018.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Lost in Translation: Challenges in Automating CUDA-to-OpenCL Translation.
  Paul Sathre, Mark Gardner, Wu-chun Feng.
  In Proceedings of the 5th International Workshop on Parallel Programming Models and Systems Software for High-End Computing (P2S2), Pittsburgh, PA, September 2012.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Scogland, Thomas R. W.
  
  
• A First Look at Integrated GPUs for Green High-Performance Computing.
  Thomas R. W. Scogland, Heshan Lin, Wu-chun Feng.
  In Proceedings of the International Conference on Energy-Aware High Performance Computing, Hamburg, Germany, September 2010.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Verma, Anshuman
  
  
• Developing Dynamic Profiling and Debugging Support in OpenCL for FPGAs.
  Anshuman Verma, Huiyang Zhou, Skip Booth, Robbie King, James Coole, Andy Keep, John Marshall, Wu-chun Feng.
  In Proceedings of the 54th Design Automation Conference (DAC), Austin, TX, June 2017.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Wanye, Frank
  
  
•   Exact Distributed Stochastic Block Partitioning.
  Frank Wanye, Vitaliy Gleyzer, Edward Kao, Wu-chun Feng.
  In Proceedings of the 2023 IEEE International Conference on Cluster Computing (CLUSTER), Santa Fe, NM, USA, November 2023.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
•   An Integrated Approach for Accelerating Stochastic Block Partitioning.
  Frank Wanye, Vitaliy Gleyzer, Edward Kao, Wu-chun Feng.
  In Proceedings of the 2023 IEEE High Performance Extreme Computing Conference (HPEC), Waltham, MA, September 2023.
  Graph Challenge Champion Award.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• On the Parallelization of MCMC for Community Detection.
  Frank Wanye, Vitaliy Gleyzer, Edward Kao, Wu-chun Feng.
  In Proceedings of the 51st International Conference on Parallel Processing (ICPP), Bordeaux, France, August 2022.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Fast Stochastic Block Partitioning via Sampling.
  Frank Wanye, Vitaliy Gleyzer, Wu-chun Feng.
  In Proceedings of the IEEE High Performance Extreme Computing Conference (HPEC), Waltham, MA, September 2019.
  Student Innovation Award.
    Paper               Citations:  [ BibTeX    XML    PlainText ]   
• Zhang, Jing
  
  
• muBLASTP: Database-Indexed Protein Sequence Search on Multicore CPUs.
  Jing Zhang, Sanchit Misra, Hao Wang, Wu-chun Feng.
  In BMC Bioinformatics, 17 (1): 443, November 2016.
    Preprint               Citations:  [ BibTeX    XML    PlainText ]   

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February 05, 2014

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